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| SOFA_CLASS (SOFA_TEMPLATE(DynamicSparseGridGeometryAlgorithms, DataTypes), SOFA_TEMPLATE(HexahedronSetGeometryAlgorithms, DataTypes)) |
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int | findNearestElementInRestPos (const Coord &pos, type::Vec3 &baryC, Real &distance) const override |
| finds a hexahedron, in its rest position, which is nearest to a given point. Computes barycentric coordinates and a distance measure. More...
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void | init () override |
| Initialization method called at graph creation and modification, during top-down traversal. More...
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core::topology::BaseMeshTopology::HexaID | getTopoIndexFromRegularGridIndex (unsigned int index, bool &existing) |
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unsigned int | getRegularGridIndexFromTopoIndex (core::topology::BaseMeshTopology::HexaID index) |
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int | findNearestElementInRestPos (const Coord &pos, sofa::type::Vec3 &baryC, Real &distance) const |
| finds a hexahedron, in its rest position, which is nearest to a given point. Computes barycentric coordinates and a distance measure. More...
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int SOFA_COMPONENT_TOPOLOGY_CONTAINER_DYNAMIC_API | findNearestElementInRestPos (const Coord &pos, sofa::type::Vec3 &baryC, Real &distance) const |
| finds a hexahedron, in its rest position, which is nearest to a given point. Computes barycentric coordinates and a distance measure. More...
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int SOFA_COMPONENT_TOPOLOGY_CONTAINER_DYNAMIC_API | findNearestElementInRestPos (const Coord &pos, sofa::type::Vec3 &baryC, Real &distance) const |
| finds a hexahedron, in its rest position, which is nearest to a given point. Computes barycentric coordinates and a distance measure. More...
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| SOFA_CLASS (SOFA_TEMPLATE(HexahedronSetGeometryAlgorithms, DataTypes), SOFA_TEMPLATE(QuadSetGeometryAlgorithms, DataTypes)) |
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void | computeHexahedronAABB (const HexaID h, Coord &minCoord, Coord &maxCoord) const |
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void | computeHexahedronRestAABB (const HexaID h, Coord &minCoord, Coord &maxCoord) const |
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Coord | computeHexahedronCenter (const HexaID h) const |
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Coord | computeHexahedronRestCenter (const HexaID h) const |
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void | getHexahedronVertexCoordinates (const HexaID h, Coord[8]) const |
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void | getRestHexahedronVertexCoordinates (const HexaID h, Coord[8]) const |
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Real | computeHexahedronVolume (const HexaID h) const |
| computes the volume of hexahedron no h and returns it More...
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void | computeHexahedronVolume (BasicArrayInterface< Real > &ai) const |
| computes the hexahedron volume of all hexahedra are store in the array interface More...
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Real | computeRestHexahedronVolume (const HexaID h) const |
| computes the hexahedron volume of hexahedron no i and returns it More...
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Real | computeShapeFunction (const LocalCoord nc, const HexahedronBinaryIndex bi) const |
| computes the shape function value for a given binary index More...
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Coord | computeNodalValue (const HexaID h, const LocalCoord nc, const VecCoord &p) const |
| computes the nodal position given the hexahedron index, its natural coordinates and the vector of nodal values More...
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void | computePositionDerivative (const HexaID h, const LocalCoord nc, const VecCoord &p, Coord dpos[3]) const |
| computes the nodal position derivative along the 3 natural coordinates given the hexahedron index, its natural coordinates and the vector of nodal values More...
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Real | computeJacobian (const HexaID h, const LocalCoord nc, const VecCoord &p) const |
| computes the Jacobian i.e. determinant of dpos/dnc on the geometry given by p (could be rest geometry) More...
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bool | isHexahedronAffine (const HexaID h, const VecCoord &p, const Real tolerance=(Real) 1e-5) const |
| test if the heaxahedron is a simple affine warp of a cube More...
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LocalCoord | computeHexahedronBarycentricCoeficients (const HexaID h, const Coord &p) const |
| computes barycentric coordinates corresponding to a given position. Warning: this method is only correct if the hexahedron is not deformed More...
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LocalCoord | computeHexahedronRestBarycentricCoeficients (const HexaID h, const Coord &p) const |
| computes barycentric coordinates corresponding to a given position in the hexa 'h' in its rest position. Warning: this method is only correct if the hexahedron is not deformed More...
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Coord | getPointPositionInHexahedron (const HexaID h, const LocalCoord &baryC) const |
| computes a position corresponding to given barycentric coordinates More...
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Coord | getRestPointPositionInHexahedron (const HexaID h, const LocalCoord &baryC) const |
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Coord | getPointPositionInHexahedron (const HexaID h, const Real baryC[3]) const |
| computes a position corresponding to given barycentric coordinates More...
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Coord | getRestPointPositionInHexahedron (const HexaID h, const Real baryC[3]) const |
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virtual int | findNearestElement (const Coord &pos, LocalCoord &baryC, Real &distance) const |
| finds a hexahedron which is nearest to a given point. Computes barycentric coordinates and a distance measure. More...
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virtual void | findNearestElements (const VecCoord &pos, type::vector< int > &elem, type::vector< LocalCoord > &baryC, type::vector< Real > &dist) const |
| given a vector of points, find the nearest hexa for each point. Computes barycentric coordinates and a distance measure. More...
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virtual void | findNearestElementsInRestPos (const VecCoord &pos, type::vector< int > &elem, type::vector< LocalCoord > &baryC, type::vector< Real > &dist) const |
| given a vector of points, find the nearest hexa, in its rest position, for each point. Computes barycentric coordinates and a distance measure. More...
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virtual Real | computeElementDistanceMeasure (const HexaID h, const Coord p) const |
| If the point is inside the element, the distance measure is < 0. If the point is outside the element, the distance measure is a squared distance to the element center. More...
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virtual Real | computeElementRestDistanceMeasure (const HexaID h, const Coord p) const |
| If the point is inside the element in its rest position, the distance measure is < 0. If the point is outside the element in its rest position, the distance measure is a squared distance to the element center. More...
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NumericalIntegrationDescriptor< Real, 3 > & | getHexahedronNumericalIntegrationDescriptor () |
| return a pointer to the container of cubature points More...
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void | draw (const core::visual::VisualParams *vparams) override |
| Render internal data of this object, for debugging purposes. More...
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void | writeMSHfile (const char *filename) const |
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| SOFA_CLASS (SOFA_TEMPLATE(QuadSetGeometryAlgorithms, DataTypes), SOFA_TEMPLATE(EdgeSetGeometryAlgorithms, DataTypes)) |
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void | computeQuadAABB (const QuadID i, Coord &minCoord, Coord &maxCoord) const |
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Coord | computeQuadCenter (const QuadID i) const |
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void | getQuadVertexCoordinates (const QuadID i, Coord[4]) const |
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void | getRestQuadVertexCoordinates (const QuadID i, Coord[4]) const |
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Real | computeQuadArea (const QuadID i) const |
| Computes the area of quad no i and returns it. More...
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void | computeQuadArea (BasicArrayInterface< Real > &ai) const |
| Computes the quad area of all quads are store in the array interface. More...
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Real | computeRestQuadArea (const QuadID i) const |
| Computes the initial area of quad no i and returns it. More...
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type::Vec< 3, double > | computeQuadNormal (const QuadID ind_q) const |
| Computes the normal vector of a quad indexed by ind_q (not normed) More...
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bool | isQuadInPlane (const QuadID ind_q, const PointID ind_p, const type::Vec< 3, Real > &plane_vect) const |
| Tests if a quad indexed by ind_q (and incident to the vertex indexed by ind_p) is included or not in the plane defined by (ind_p, plane_vect) More...
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bool | isPointInQuad (const QuadID ind_q, const sofa::type::Vec< 3, Real > &p) const |
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void | draw (const core::visual::VisualParams *vparams) override |
| Render internal data of this object, for debugging purposes. More...
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void | writeMSHfile (const char *filename) const |
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| SOFA_CLASS (SOFA_TEMPLATE(EdgeSetGeometryAlgorithms, DataTypes), SOFA_TEMPLATE(PointSetGeometryAlgorithms, DataTypes)) |
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Real | computeEdgeLength (const EdgeID i) const |
| computes the length of edge no i and returns it More...
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void | computeEdgeLength (BasicArrayInterface< Real > &ai) const |
| computes the edge length of all edges and stores it in the array interface More...
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Real | computeRestEdgeLength (const EdgeID i) const |
| computes the initial length of edge no i and returns it More...
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Real | computeRestSquareEdgeLength (const EdgeID i) const |
| computes the initial square length of edge no i and returns it More...
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void | computeEdgeAABB (const EdgeID i, CPos &minCoord, CPos &maxCoord) const |
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Coord | computeEdgeCenter (const EdgeID i) const |
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Coord | computeEdgeDirection (const EdgeID i) const |
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Coord | computeRestEdgeDirection (const EdgeID i) const |
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void | getEdgeVertexCoordinates (const EdgeID i, Coord[2]) const |
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void | getRestEdgeVertexCoordinates (const EdgeID i, Coord[2]) const |
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bool | isPointOnEdge (const sofa::type::Vec< 3, Real > &pt, const EdgeID ind_e) const |
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sofa::type::vector< SReal > | computeEdgeBarycentricCoordinates (const sofa::type::Vec< 3, Real > &p, PointID ind_p1, PointID ind_p2, bool useRestPosition=false) const |
| Compute the barycentric coordinates of input point p between edge of indices [ind_p1; ind_p2] using either current position or restPosition depending on useRestPosition value. More...
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sofa::type::vector< SReal > | computePointProjectionOnEdge (const EdgeID i, sofa::type::Vec< 3, Real > coord_x, bool &intersected) |
| Compute the projection coordinate of a point C on the edge i. Using compute2EdgesIntersection(). More...
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Coord | compute2EdgesIntersection (const Coord edge1[2], const Coord edge2[2], bool &intersected) |
| Compute the intersection coordinate of the 2 input straight lines. Lines vector director are computed using coord given in input. More...
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Coord | computeEdgeSegmentIntersection (const EdgeID edgeID, const type::Vec3 &a, const type::Vec3 &b, bool &intersected) |
| Compute the intersection coordinate of an Edge from the topology and a segment defined by 2 points [a, b]. More...
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bool | computeEdgePlaneIntersection (EdgeID edgeID, sofa::type::Vec< 3, Real > pointOnPlane, sofa::type::Vec< 3, Real > normalOfPlane, sofa::type::Vec< 3, Real > &intersection) |
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bool | computeRestEdgePlaneIntersection (EdgeID edgeID, sofa::type::Vec< 3, Real > pointOnPlane, sofa::type::Vec< 3, Real > normalOfPlane, sofa::type::Vec< 3, Real > &intersection) |
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void | computeLocalFrameEdgeWeights (type::vector< EdgeID > &numEdges, type::vector< Edge > &edges, type::vector< Vec3d > &weights) const |
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void | initPointAdded (PointID indice, const core::topology::PointAncestorElem &ancestorElem, const type::vector< VecCoord * > &coordVecs, const type::vector< VecDeriv * > &derivVecs) override |
| Process the added point initialization according to the topology and local coordinates. More...
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NumericalIntegrationDescriptor< Real, 1 > & | getEdgeNumericalIntegrationDescriptor () |
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bool | computeEdgeSegmentIntersection (EdgeID edgeID, const type::Vec3 &a, const type::Vec3 &b, Real &baryCoef) |
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sofa::type::vector< SReal > | compute2PointsBarycoefs (const sofa::type::Vec< 3, Real > &p, PointID ind_p1, PointID ind_p2) const =delete |
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sofa::type::vector< SReal > | computeRest2PointsBarycoefs (const sofa::type::Vec< 3, Real > &p, PointID ind_p1, PointID ind_p2) const =delete |
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void | writeMSHfile (const char *filename) const |
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| SOFA_CLASS (SOFA_TEMPLATE(PointSetGeometryAlgorithms, DataTypes), core::topology::GeometryAlgorithms) |
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Angle | computeAngle (PointID ind_p0, PointID ind_p1, PointID ind_p2) const |
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void | init () override |
| Initialization method called at graph creation and modification, during top-down traversal. More...
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void | reinit () override |
| Update method called when variables used in precomputation are modified. More...
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void | computeBBox (const core::ExecParams *params, bool onlyVisible=false) override |
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Coord | getPointSetCenter () const |
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void | getEnclosingSphere (Coord ¢er, Real &radius) const |
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void | getAABB (Real bb[6]) const |
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void | getAABB (CPos &minCoord, CPos &maxCoord) const |
| Returns the axis aligned bounding box. More...
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const Coord & | getPointPosition (const PointID pointId) const |
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const Coord & | getPointRestPosition (const PointID pointId) const |
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sofa::core::State< DataTypes > * | getDOF () const |
| Returns the object where the DOFs are stored. More...
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float | getIndicesScale () const |
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void | initPointsAdded (const type::vector< sofa::Index > &indices, const type::vector< core::topology::PointAncestorElem > &ancestorElems, const type::vector< core::VecCoordId > &coordVecs, const type::vector< core::VecDerivId > &derivVecs) override |
| Called by the state change callback to initialize added points according to the topology (topology element & local coordinates) More...
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| SOFA_CLASS (GeometryAlgorithms, BaseTopologyObject) |
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void | init () override |
| Initialization method called at graph creation and modification, during top-down traversal. More...
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| SOFA_CLASS (BaseTopologyObject, core::objectmodel::BaseObject) |
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bool | insertInNode (objectmodel::BaseNode *node) override |
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bool | removeInNode (objectmodel::BaseNode *node) override |
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| SOFA_CLASS (BaseObject, Base) |
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void | setSrc (const std::string &v, std::vector< std::string > *attributeList=nullptr) |
| Sets a source Object and parses it to collect dependent Data. More...
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void | setSrc (const std::string &v, const BaseObject *loader, std::vector< std::string > *attributeList=nullptr) |
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Base * | findLinkDestClass (const BaseClass *destType, const std::string &path, const BaseLink *link) override |
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virtual std::string | getPathName () const override |
| Return the full path name of this object. More...
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SReal | getTime () const |
| Current time. More...
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const BaseContext * | getContext () const |
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BaseContext * | getContext () |
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const BaseObject * | getMaster () const |
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BaseObject * | getMaster () |
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const VecSlaves & | getSlaves () const |
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BaseObject * | getSlave (const std::string &name) const |
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virtual void | addSlave (BaseObject::SPtr s) |
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virtual void | removeSlave (BaseObject::SPtr s) |
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virtual void | handleEvent (Event *) |
| Handle an event. More...
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virtual void | handleTopologyChange () |
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virtual void | handleTopologyChange (core::topology::Topology *t) |
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void | parse (BaseObjectDescription *arg) override |
| Parse the given description to assign values to this object's fields and potentially other parameters. More...
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virtual void | bwdInit () |
| Initialization method called at graph creation and modification, during bottom-up traversal. More...
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void | updateInternal () |
| Update method called when variables (used to compute other internal variables) are modified. More...
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virtual void | storeResetState () |
| Save the initial state for later uses in reset() More...
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virtual void | reset () |
| Reset to initial state. More...
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virtual void | cleanup () |
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virtual const BaseClass * | getClass () const |
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void | addDeprecatedAttribute (lifecycle::DeprecatedData *attribute) |
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void | addUpdateCallback (const std::string &name, std::initializer_list< BaseData * > inputs, std::function< sofa::core::objectmodel::ComponentState(const DataTracker &)> function, std::initializer_list< BaseData * > outputs) |
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void | addOutputsToCallback (const std::string &name, std::initializer_list< BaseData * > outputs) |
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const std::string & | getName () const |
| Accessor to the object name. More...
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void | setName (const std::string &n) |
| Set the name of this object. More...
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void | setName (const std::string &n, int counter) |
| Set the name of this object, adding an integer counter. More...
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std::string | getTypeName () const |
| Get the type name of this object (i.e. class and template types) More...
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virtual std::string | getClassName () const |
| Get the class name of this object. More...
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virtual std::string | getTemplateName () const final |
| Get the template type names (if any) used to instantiate this object. More...
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std::string | getNameSpaceName () const |
| Get the template type names (if any) used to instantiate this object. More...
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void | setDefinitionSourceFileName (const std::string &sourceFileName) |
| Set the source filename (where the component is implemented) More...
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const std::string & | getDefinitionSourceFileName () const |
| Get the source filename (where the component is implemented) More...
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void | setDefinitionSourceFilePos (const int) |
| Set the source location (where the component is implemented) More...
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int | getDefinitionSourceFilePos () const |
| Get the source location (where the component is implemented) More...
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void | setInstanciationSourceFileName (const std::string &sourceFileName) |
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const std::string & | getInstanciationSourceFileName () const |
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void | setInstanciationSourceFilePos (const int) |
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int | getInstanciationSourceFilePos () const |
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void | addMessage (const sofa::helper::logging::Message &m) const |
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size_t | countLoggedMessages (sofa::helper::logging::Message::TypeSet t=sofa::helper::logging::Message::AnyTypes) const |
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const std::deque< sofa::helper::logging::Message > & | getLoggedMessages () const |
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const std::string | getLoggedMessagesAsString (sofa::helper::logging::Message::TypeSet t=sofa::helper::logging::Message::AnyTypes) const |
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void | clearLoggedMessages () const |
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bool | notMuted () const |
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const sofa::core::objectmodel::TagSet & | getTags () const |
| Represents the subsets the object belongs to. More...
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bool | hasTag (Tag t) const |
| Return true if the object belong to the given subset. More...
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void | addTag (Tag t) |
| Add a subset qualification to the object. More...
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void | removeTag (Tag t) |
| Remove a subset qualification to the object. More...
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ComponentState | getComponentState () const |
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bool | isComponentStateValid () const |
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virtual bool | parseField (const std::string &attribute, const std::string &value) |
| Assign one field value (Data or Link) More...
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virtual bool | hasField (const std::string &attribute) const |
| Check if a given Data field or Link exists. More...
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void | parseFields (const std::list< std::string > &str) |
| Assign the field values stored in the given list of name + value pairs of strings. More...
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virtual void | parseFields (const std::map< std::string, std::string * > &str) |
| Assign the field values stored in the given map of name -> value pairs. More...
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void | writeDatas (std::map< std::string, std::string * > &str) |
| Write the current field values to the given map of name -> value pairs. More...
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void | writeDatas (std::ostream &out, const std::string &separator=" ") |
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BaseData * | findData (const std::string &name) const |
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std::vector< BaseData * > | findGlobalField (const std::string &name) const |
| Find data fields given a name: several can be found as we look into the alias map. More...
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BaseLink * | findLink (const std::string &name) const |
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std::vector< BaseLink * > | findLinks (const std::string &name) const |
| Find link fields given a name: several can be found as we look into the alias map. More...
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virtual void | updateLinks (bool logErrors=true) |
| Update pointers in case the pointed-to objects have appeared. More...
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template<class T > |
BaseData::BaseInitData | initData (::sofa::core::objectmodel::Data< T > *field, const char *name, const char *help, ::sofa::core::objectmodel::BaseData::DataFlags dataflags) |
| Helper method used to initialize a data field containing a value of type T. More...
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template<class T > |
BaseData::BaseInitData | initData (Data< T > *field, const char *name, const char *help, bool isDisplayed=true, bool isReadOnly=false) |
| Helper method used to initialize a data field containing a value of type T. More...
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template<class T > |
Data< T >::InitData | initData (Data< T > *field, const T &value, const char *name, const char *help, bool isDisplayed=true, bool isReadOnly=false) |
| Helper method used to initialize a data field containing a value of type T. More...
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void | addData (BaseData *f, const std::string &name) |
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void | addData (BaseData *f) |
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void | removeData (BaseData *f) |
| Remove a data field. More...
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void | addAlias (BaseData *field, const char *alias) |
| Add an alias to a Data. More...
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void | addLink (BaseLink *l) |
| Add a link. More...
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void | addAlias (BaseLink *link, const char *alias) |
| Add an alias to a Link. More...
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const VecData & | getDataFields () const |
| Accessor to the vector containing all the fields of this object. More...
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const MapData & | getDataAliases () const |
| Accessor to the map containing all the aliases of this object. More...
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const VecLink & | getLinks () const |
| Accessor to the vector containing all the fields of this object. More...
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const MapLink & | getLinkAliases () const |
| Accessor to the map containing all the aliases of this object. More...
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virtual bool | findDataLinkDest (BaseData *&ptr, const std::string &path, const BaseLink *link) |
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template<class T > |
bool | findLinkDest (T *&ptr, const std::string &path, const BaseLink *link) |
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